EFSA Journal

EFSA publishes all its scientific outputs, including its scientific opinions, in the EFSA Journal. It also issues a range of supporting publications. See also Definitions of EFSA Scientific Outputs and Supporting Publications.

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Outcome of EC/EFSA questionnaire (2016) on use of Whole Genome Sequencing (WGS) for food‐ and waterborne pathogens isolated from animals, food, feed and related environmental samples in EU/EFTA countries

Whole Genome Sequencing (WGS) is becoming increasingly used in public health and food safety laboratories. To date, there is a wide variation in the level of implementation of WGS among laboratories from different sectors in different countries, the type ...

Closing gaps for performing a risk assessment on Listeria monocytogenes in ready-to-eat (RTE) foods: activity 3, the comparison of isolates from different compartments along the food chain, and from humans using whole genome sequencing (WGS) analysis

No abstract available. Keywords:  Listeria monocytogenes, Whole Genome Sequencing, Genetic Diversity, Phylogeny, Food, Human doi:  10.2903/sp.efsa.2017.EN-1151 Question Number:  EFSA-Q-2014-00026 Adopted:  13 December 2016 Contact:  biocontam@efsa.europa. ...

Molecular Typing Data Collection

Molecular typing or microbial DNA fingerprinting has developed rapidly in recent years. Data on the molecular testing of food-borne pathogens such as Salmonella, Listeria monocytogenes and Shiga toxin-producing Escherichia coli could substantially contrib ...

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